Crystal structure of CLK3 in complex with macrocycle ODS2002941
Chaikuad, A., Benderitter, P., Hoflack, J., Denis, A., Knapp, S., Structural Genomics Consortium (SGC)To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Dual specificity protein kinase CLK3 | 360 | Homo sapiens | Mutation(s): 0  Gene Names: CLK3 EC: 2.7.12.1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P49761 (Homo sapiens) Explore P49761  Go to UniProtKB:  P49761 | |||||
PHAROS:  P49761 GTEx:  ENSG00000179335  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P49761 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
Q8B (Subject of Investigation/LOI) Query on Q8B | T [auth A] | N-cyclopentyl-2-[(11,15-dimethyl-10-oxo-8-oxa-2,11,15,19,21,23-hexazatetracyclo[15.6.1.13,7.020,24]pentacosa-1(23),3(25),4,6,17,20(24),21-heptaen-6-yl)oxy]acetamide C27 H35 N7 O4 MUBFRUUNEUDLMA-UHFFFAOYSA-N | |||
PO4 Query on PO4 | B [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
EDO Query on EDO | C [auth A] D [auth A] E [auth A] F [auth A] G [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 89.02 | α = 90 |
b = 62.24 | β = 97.79 |
c = 75.69 | γ = 90 |
Software Name | Purpose |
---|---|
SCALA | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
iMOSFLM | data reduction |
PHASER | phasing |