5OF4

The cryo-EM structure of human TFIIH


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.4 Å
  • Aggregation State: Particle
  • Reconstruction Method: Single Particle

Literature

Macromolecules
Sequence Display for 5OF4

Classification: TRANSCRIPTION

Total Structure Weight: 306618.25

Macromolecule Entities
Molecule Chains Length Organism Details
TFIIH basal transcription factor complex helicase XPB subunit,XPB,TFIIH basal transcription factor complex helicase XPB subunit A 553 Homo sapiens EC#: 3.6.4.12 IUBMB
Gene Name(s): ERCC3 Gene View XPB XPBC
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
TFIIH basal transcription factor complex helicase XPD subunit B 760 Homo sapiens EC#: 3.6.4.12 IUBMB
Gene Name(s): ERCC2 Gene View XPD XPDC
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
General transcription factor IIH subunit 4,p52,General transcription factor IIH subunit 4 D 85 Homo sapiens Gene Name(s): GTF2H4 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
General transcription factor IIH subunit 2 E 395 Homo sapiens Gene Name(s): GTF2H2 Gene View BTF2P44
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
General transcription factor IIH subunit 3 F 308 Homo sapiens Gene Name(s): GTF2H3 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
General transcription factor IIH subunit 5 G 71 Homo sapiens Gene Name(s): GTF2H5 Gene View C6orf175 TTDA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
MAT1 H 124 Homo sapiens Details: Sequence register unassigned.
Unassigned secondary structure elements. Z 270 Homo sapiens Details: Sequence unassigned.
Unassigned secondary structure elements (p52 region) Y 232 Homo sapiens Details: Sequence unassigned
Unassigned secondary structure elements (XPB NTE region) X 78 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SF4
Query on SF4

B IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-VKOJMFJBAC
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
UNK
Query on UNK
A, D, H, X, Y, Z L-PEPTIDE LINKING C4 H9 N O2 --

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.4 Å
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-07-10
  • Released Date: 2017-09-13
  • Deposition author(s): Greber, B.J., Nguyen, T.H.D., Fang, J., Afonine, P.V., Adams, P.D., Nogales, E.

Revision History

No revisions since initial release