5ITX

Crystal Structure of Human NEIL1(P2G R242K) bound to duplex DNA containing Thymine Glycol


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 5ITX

Classification: DNA BINDING PROTEIN / DNA

Total Structure Weight: 156391.98


Macromolecule Entities
Molecule Chains Length Organism Details
Endonuclease 8-like 1 A, B 390 Homo sapiens EC#: 3.2.2 IUBMB 4.2.99.18 IUBMB
Gene Name(s): NEIL1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Endonuclease 8-like 1 E 400 Homo sapiens EC#: 3.2.2 IUBMB 4.2.99.18 IUBMB
Mutation: P2G, K242R
Gene Name(s): NEIL1 Gene View
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (26-MER) C, D, F 26 Unidentified

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CTG
Query on CTG
C, D, F DNA LINKING C10 H17 N2 O10 P DT

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.192
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 73.99 α = 90.00
b = 109.38 β = 90.00
c = 170.97 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-03-17
  • Released Date: 2016-07-06
  • Deposition author(s): Zhu, C., Lu, L., Zhang, J., Yue, Z., Song, J., Zong, S., Liu, M., Stovicek, O., Gao, Y., Yi, C.

Revision History

  • 2016-08-03
    Type: Database references