5W5I

Human IFIT1 dimer with PPP-AAAA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.219 
  • R-Value Observed: 0.220 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structural insights into IFIT1 dimerization and conformational changes associated with mRNA binding

Abbas, Y.M.Martinez-Montero, S.Cencic, R.Pelletier, J.Damha, M.J.Pawelek, P.D.Nagar, B.

To be published.

Macromolecules

Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Interferon-induced protein with tetratricopeptide repeats 1
A, C
479Homo sapiensMutation(s): 0 
Gene Names: IFIT1G10P1IFI56IFNAI1ISG56
UniProt & NIH Common Fund Data Resources
Find proteins for P09914 (Homo sapiens)
Explore P09914 
Go to UniProtKB:  P09914
PHAROS:  P09914
GTEx:  ENSG00000185745 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP09914
Sequence Annotations
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  • Reference Sequence

Find similar nucleic acids by:  Sequence   |   3D Structure  

Entity ID: 2
MoleculeChains LengthOrganismImage
RNA (5'-D(*(ATP))-R(P*AP*AP*A)-3')
B, D
4unidentified
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.219 
  • R-Value Observed: 0.220 
  • Space Group: I 4
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 184.789α = 90
b = 184.789β = 90
c = 88.864γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data scaling
PHASERphasing
Cootmodel building

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2017-06-28
    Type: Initial release
  • Version 1.1: 2024-03-13
    Changes: Data collection, Database references