5LV0

Structure of Human Neurolysin (E475Q) in complex with amyloid-beta 35-40 peptide product


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.210 
  • R-Value Observed: 0.212 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structural and functional analysis of Neurolysin, a new component of the mitochondrial peptidolytic network

Teixeira, P.F.Masuyer, G.Pinho, C.Branca, R.M.M.Kmiec, B.Wallin, C.Warmlander, S.Berntsson, R.P.-A.Ankarcrona, M.Graslund, A.Lehtio, J.Stenmark, P.Glaser, E.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Neurolysin, mitochondrial
A, B
686Homo sapiensMutation(s): 1 
Gene Names: NLNAGTBPKIAA1226
EC: 3.4.24.16
UniProt & NIH Common Fund Data Resources
Find proteins for Q9BYT8 (Homo sapiens)
Explore Q9BYT8 
Go to UniProtKB:  Q9BYT8
PHAROS:  Q9BYT8
GTEx:  ENSG00000123213 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9BYT8
Sequence Annotations
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  • Reference Sequence

Find similar proteins by:  Sequence   |   3D Structure  

Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
GLY-VAL-VAL amyloid 35-40 fragment
C, D
6Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P05067 (Homo sapiens)
Explore P05067 
Go to UniProtKB:  P05067
PHAROS:  P05067
GTEx:  ENSG00000142192 
Entity Groups  
UniProt GroupP05067
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.210 
  • R-Value Observed: 0.212 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 131.341α = 90
b = 131.341β = 90
c = 195.979γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
iMOSFLMdata reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Swedish Research CouncilSweden2014-5667

Revision History  (Full details and data files)

  • Version 1.0: 2017-12-06
    Type: Initial release
  • Version 1.1: 2018-02-07
    Changes: Database references, Structure summary
  • Version 1.2: 2024-01-17
    Changes: Data collection, Database references, Derived calculations, Refinement description