4RKJ

Crystal structure of thrombin mutant S195T (free form)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.207
  • R-Value Work: 0.156

Literature

Macromolecules
Sequence Display for 4RKJ

Classification: HYDROLASE

Total Structure Weight: 33957.88

Macromolecule Entities
Molecule Chains Length Organism Details
Thrombin light chain A 34 Homo sapiens EC#: 3.4.21.5 IUBMB
Gene Name(s): F2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Thrombin heavy chain B 259 Homo sapiens EC#: 3.4.21.5 IUBMB
Mutation: S195T
Gene Name(s): F2 Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.207
  • R-Value Work: 0.156
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 61.42 α = 90.00
b = 91.11 β = 90.00
c = 50.55 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-10-13
  • Released Date: 2015-03-11
  • Deposition author(s): Pelc, A.L., Chen, Z., Gohara, D.W., Vogt, A.D., Pozzi, N., Di Cera, E.

Revision History

No revisions since initial release