4F7L

Crystal structure of human CDK8/CYCC in complex with compound 2 (tert-butyl [3-({[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]carbamoyl}amino)propyl]carbamate)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.224

Literature

Macromolecules
Sequence Display for 4F7L

Classification: TRANSFERASE / TRANSCRIPTION / INHIBITOR

Total Structure Weight: 81130.48

Macromolecule Entities
Molecule Chains Length Organism Details
Cyclin-dependent kinase 8 A 405 Homo sapiens EC#: 2.7.11.22 IUBMB 2.7.11.23 IUBMB
Fragment: UNP residues 1-403
Gene Name(s): CDK8 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Cyclin-C B 287 Homo sapiens Gene Name(s): CCNC Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
0SO
Query on 0SO

A tert-butyl [3-({[3-tert-butyl-1-(4-methylphenyl)- 1H-pyrazol-5-yl]carbamoyl}amino)propyl]carbamate
C23 H35 N5 O3
NTCPUSCJDOSUEX-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.224
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 71.82 α = 90.00
b = 71.24 β = 90.00
c = 171.71 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-16
  • Released Date: 2013-05-01
  • Deposition author(s): Schneider, E.V., Boettcher, J., Huber, R., Maskos, K.

Revision History

  • 2015-04-01
    Type: Database references