3EQR

Crystal Structure of Ack1 with compound T74


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.210

Literature

Macromolecules
Sequence Display for 3EQR

Classification: TRANSFERASE

Total Structure Weight: 64141.57

Macromolecule Entities
Molecule Chains Length Organism Details
Activated CDC42 kinase 1 A, B 276 Homo sapiens EC#: 2.7.10.2 IUBMB 2.7.11.1 IUBMB
Fragment: UNP residues 117-392
Gene Name(s): TNK2 Gene View ACK1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
T74
Query on T74

A, B N~3~-(2,6-dimethylphenyl)-1-(3-methoxy-3- methylbutyl)-N~6~-(4-piperazin-1-ylphenyl)- 1H-pyrazolo[3,4-d]pyrimidine-3,6-diamine
C29 H38 N8 O
RDCUCMDUDZPOOV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
T74 IC50: 20 nM (100) BindingDB
Ki: 2 - 10 nM (100) BindingDB

Ki: 2 nM  BindingMOAD
Ki: 2 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.210
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 70.79 α = 90.00
b = 42.92 β = 99.67
c = 92.83 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-10-01
  • Released Date: 2008-12-02
  • Deposition author(s): Liu, J., Wang, Z., Walker, N.P.C.

Revision History

  • 2011-07-13
    Type: Version format compliance