3BPL

Crystal structure of the IL4-IL4R-Common Gamma ternary complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.93 Å
  • R-Value Free: 0.297
  • R-Value Work: 0.222

Literature

Macromolecules
Sequence Display for 3BPL

Classification: Cytokine / Cytokine receptor

Total Structure Weight: 64084.88

Macromolecule Entities
Molecule Chains Length Organism Details
Interleukin-4 A 129 Homo sapiens Gene Name(s): IL4 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Interleukin-4 receptor alpha chain B 205 Homo sapiens Fragment: Extracellular domain, residues 27-227
Mutation: N28Q, N73Q, N109Q, N151Q
Gene Name(s): IL4R Gene View IL4RA 582J2.1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Cytokine receptor common gamma chain C 199 Homo sapiens Fragment: Extracellular domain, residues 56-254
Mutation: N53Q
Gene Name(s): IL2RG Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

B, C N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FUC
Query on FUC

B ALPHA-L-FUCOSE
C6 H12 O5
SHZGCJCMOBCMKK-SXUWKVJYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.93 Å
  • R-Value Free: 0.297
  • R-Value Work: 0.222
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 52.58 α = 90.00
b = 86.65 β = 90.00
c = 175.67 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-12-18
  • Released Date: 2008-02-05
  • Deposition author(s): Garcia, K.C.

Revision History

  • 2011-07-13
    Type: Advisory, Version format compliance