Crystal Structure Analysis of Vitamin D receptor
Kashiwagi, H., Ono, Y., Itoh, S., Iijima, S., Ichikawa, F., Harada, S., Takeda, S., Sekiguchi, N., Ishigai, M., Takahashi, T.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Vitamin D3 receptor | 253 | Homo sapiens | Mutation(s): 0  Gene Names: VDR, NR1I1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P11473 (Homo sapiens) Explore P11473  Go to UniProtKB:  P11473 | |||||
PHAROS:  P11473 GTEx:  ENSG00000111424  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P11473 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DS4 Query on DS4 | B [auth A] | [3-fluoro-2'-methyl-4'-(3-{3-methyl-4-[(1E)-4,4,4-trifluoro-3-hydroxy-3-(trifluoromethyl)but-1-en-1-yl]phenyl}pentan-3-yl)biphenyl-4-yl]acetic acid C32 H31 F7 O3 URXAORZDUZDLDK-BUHFOSPRSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 45.217 | α = 90 |
b = 51.124 | β = 90 |
c = 132.664 | γ = 90 |
Software Name | Purpose |
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SCALEPACK | data scaling |
BUSTER-TNT | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
BUSTER | refinement |