3O3U

Crystal Structure of Human Receptor for Advanced Glycation Endproducts (RAGE)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.184
  • R-Value Work: 0.168

Literature

Macromolecules
Sequence Display for 3O3U

Classification: TRANSPORT PROTEIN SIGNALING PROTEIN

Total Structure Weight: 64034.51

Macromolecule Entities
Molecule Chains Length Organism Details
Maltose-binding periplasmic protein, Advanced glycosylation end product-specific receptor N 581 Escherichia coli Homo sapiens Fragment: MBP: UNP residues 28-384, RAGE: UNP residues 23-231
Gene Name(s): malE b4034 JW3994 AGER Gene View RAGE
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MLR
Query on MLR

N MALTOTRIOSE
AMYLOTRIOSE (Synonym)
C18 H32 O16
FYGDTMLNYKFZSV-PXXRMHSHSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

N SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.184
  • R-Value Work: 0.168
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 81.74 α = 90.00
b = 89.31 β = 90.00
c = 97.98 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-07-26
  • Released Date: 2010-10-13
  • Deposition author(s): Park, H., Boyington, J.C.

Revision History

  • 2011-07-13
    Type: Version format compliance
  • 2017-08-02
    Type: Advisory, Refinement description, Source and taxonomy