3DJJ

Catalytic cycle of human glutathione reductase near 1 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Observed: 0.113

Literature

Macromolecules
Sequence Display for 3DJJ

Classification: OXIDOREDUCTASE

Total Structure Weight: 54763.07

Macromolecule Entities
Molecule Chains Length Organism Details
Glutathione reductase, mitochondrial precursor A 478 Homo sapiens EC#: 1.8.1.7 IUBMB
Fragment: UNP residues 45 to 522
Gene Name(s): GSR Gene View GLUR GRD1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NDP
Query on NDP

A NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Observed: 0.113
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 119.67 α = 90.00
b = 62.36 β = 122.29
c = 84.16 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-06-23
  • Released Date: 2008-08-05
  • Deposition author(s): Berkholz, D.S., Faber, H.R., Savvides, S.N., Karplus, P.A.

Revision History

  • 2011-07-13
    Type: Non-polymer description, Version format compliance
  • 2013-12-25
    Type: Structure summary