3D2S

Crystal structure of MBNL1 tandem zinc finger 3 and 4 domain in complex with CGCUGU RNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.224

Literature

Macromolecules
Sequence Display for 3D2S

Classification: METAL BINDING PROTEIN / RNA

Total Structure Weight: 40672.60


Macromolecule Entities
Molecule Chains Length Organism Details
Muscleblind-like protein 1 A, B, C, D 70 Homo sapiens Fragment: tandem zinc finger 3 and 4 domains (UNP residues 178-246)
Gene Name(s): MBNL1 Gene View EXP KIAA0428 MBNL
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*CP*GP*CP*UP*GP*U)-3' E, F, G, H 6 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.224
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 56.42 α = 90.00
b = 56.90 β = 108.81
c = 58.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-05-08
  • Released Date: 2008-12-02
  • Deposition author(s): Teplova, M., Patel, D.J.

Revision History

  • 2011-07-13
    Type: Advisory, Refinement description, Version format compliance