2Z4J

Crystal structure of AR LBD with SHP peptide NR Box 2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 2Z4J

Classification: TRANSCRIPTION

Total Structure Weight: 30363.86

Macromolecule Entities
Molecule Chains Length Organism Details
Androgen receptor A 248 Homo sapiens Fragment: C-terminal domain
Gene Name(s): AR Gene View DHTR NR3C4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Nuclear receptor 0B2 B 10 Homo sapiens Fragment: residues 115-124
Gene Name(s): NR0B2 Gene View SHP
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DHT
Query on DHT

A 5-ALPHA-DIHYDROTESTOSTERONE
C19 H30 O2
NVKAWKQGWWIWPM-ABEVXSGRSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
DHT EC50: 0.05 - 20 nM (100) BindingDB
IC50: 0 nM (100) BindingDB
Ki: 0.2 - 10 nM (100) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.207
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 55.98 α = 90.00
b = 66.54 β = 90.00
c = 71.84 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-06-19
  • Released Date: 2007-12-04
  • Deposition author(s): Jouravel, N., Fletterick, R.J.

Revision History

  • 2011-07-13
    Type: Version format compliance