2J4A

Human Thyroid hormone receptor beta ligand binding domain in complex with KB131084


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.230

Literature

Macromolecules
Sequence Display for 2J4A

Classification: RECEPTOR

Total Structure Weight: 29013.20

Macromolecule Entities
Molecule Chains Length Organism Details
THYROID HORMONE RECEPTOR BETA-1 A 253 Homo sapiens Fragment: LIGAND BINDING DOMAIN, RESIDUES 209-461
Mutation: N331S
Gene Name(s): THRB Gene View ERBA2 NR1A2 THR1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OEF
Query on OEF

A 3,5-DIBROMO-4-(3-ISOPROPYL-PHENOXY)BENZOIC ACID
C18 H18 Br2 O4
DGODJDXDANWOEP-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
OEF IC50: 0.025 - 0.11 nM (98 - 99) BindingDB

N/A in BindingMoad
IC50: 0.025 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.230
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 77.21 α = 90.00
b = 107.42 β = 90.00
c = 67.21 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-08-28
  • Released Date: 2007-09-25
  • Deposition author(s): Farnegardh, M.

Revision History

  • 2011-05-08
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance