2CFH

Structure of the Bet3-TPC6B core of TRAPP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 2CFH

Classification: TRANSPORT

Total Structure Weight: 80360.34

Macromolecule Entities
Molecule Chains Length Organism Details
TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 A, B 194 Homo sapiens Gene Name(s): TRAPPC3 Gene View BET3 CDABP0066
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B C, D 158 Homo sapiens Gene Name(s): TRAPPC6B Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PLM
Query on PLM

A, B PALMITIC ACID
C16 H32 O2
IPCSVZSSVZVIGE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CSO
Query on CSO
C, D L-PEPTIDE LINKING C3 H7 N O3 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.221
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 69.45 α = 90.00
b = 69.59 β = 91.55
c = 144.01 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-02-21
  • Released Date: 2006-07-12
  • Deposition author(s): Kummel, D., Muller, J.J., Roske, Y., Henke, N., Heinemann, U.

Revision History

  • 2011-07-13
    Type: Advisory, Version format compliance
  • 2011-10-26
    Type: Atomic model, Derived calculations, Non-polymer description, Other, Refinement description, Structure summary