2BH9

X-RAY STRUCTURE OF A DELETION VARIANT OF HUMAN GLUCOSE 6-PHOSPHATE DEHYDROGENASE COMPLEXED WITH STRUCTURAL AND COENZYME NADP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 2BH9

Classification: OXIDOREDUCTASE

Total Structure Weight: 58068.26

Macromolecule Entities
Molecule Chains Length Organism Details
GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE A 489 Homo sapiens EC#: 1.1.1.49 IUBMB
Fragment: RESIDUES 26-514
Mutation: H27V
Gene Name(s): G6PD Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAP
Query on NAP

A NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE (Synonym)
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.196
  • Space Group: F 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 60.76 α = 90.00
b = 172.48 β = 90.00
c = 217.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-01-08
  • Released Date: 2005-04-25
  • Deposition author(s): Gover, S., Vandeputte-Rutten, L., Au, S.W.N., Adams, M.J.

Revision History

  • Version 1_0: 2005-04-25

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance