2A07

Crystal Structure of Foxp2 bound Specifically to DNA.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.222

Literature

Macromolecules
Sequence Display for 2A07

Classification: Transcription / DNA

Total Structure Weight: 92060.45


Macromolecule Entities
Molecule Chains Length Organism Details
Forkhead box protein P2 F, G, H..., I, J, KF, G, H, I, J, K 93 Homo sapiens Fragment: Foxp2 Forkhead Domain
Mutation: D502I
Gene Name(s): FOXP2 Gene View CAGH44 TNRC10
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*AP*AP*CP*TP*AP*TP*GP*AP*AP*AP*CP*AP*AP*AP*TP*TP*TP*TP*CP*CP*T)-3' A, C 21 synthetic Promoter Element of a Foxp regulated gene, plus strand
5'-D(*TP*TP*AP*GP*GP*AP*AP*AP*AP*TP*TP*TP*GP*TP*TP*TP*CP*AP*TP*AP*G)-3' B, D 21 synthetic Promoter Element of a Foxp regulated gene, minus strand

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

F, G, H, I, J, K MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.222
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 67.54 α = 90.00
b = 124.21 β = 110.81
c = 67.67 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-06-16
  • Released Date: 2006-01-31
  • Deposition author(s): Stroud, J.C., Wu, Y., Bates, D.L., Han, A., Nowick, K., Paabo, S., Tong, H., Chen, L.

Revision History

  • 2008-04-30
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance