Macromolecules
Sequence Display for 1Y7V

Classification: HYDROLASE

Total Structure Weight: 113774.30

Macromolecule Entities
Molecule Chains Length Organism Details
Glucosylceramidase A, B 497 Homo sapiens EC#: 3.2.1.45 IUBMB
Mutation: R495H
Gene Name(s): GBA Gene View GC Gene View GLUC
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
INS
Query on INS

A, B 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE
MYO-INOSITOL (Synonym)
C6 H12 O6
CDAISMWEOUEBRE-GPIVLXJGSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.242
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 104.49 α = 90.00
b = 285.61 β = 90.00
c = 91.51 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-12-10
  • Released Date: 2005-04-12
  • Deposition author(s): Premkumar, L., Sawkar, A.R., Boldin-Adamsky, S., Toker, L., Silman, I., Kelly, J.W., Futerman, A.H., Sussman, J.L., Israel Structural Proteomics Center (ISPC)

Revision History

  • Version 1_0: 2005-04-12

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Non-polymer description, Version format compliance