5J6G

Recognition of the MHC class Ib molecule H2-Q10 by the natural killer cell receptor Ly49C


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 5J6G

Classification: IMMUNE SYSTEM

Total Structure Weight: 125976.84

Macromolecule Entities
Molecule Chains Length Organism Details
H-2 class I histocompatibility antigen, Q10 alpha chain A, C 300 Mus musculus Gene Name(s): H2-Q10
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Beta-2-microglobulin B, D 100 Mus musculus Gene Name(s): B2m
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
VAL-GLY-ILE-THR-ASN-VAL-ASP-LEU E, F 8 Mus musculus EC#: 2.4.99.18 IUBMB
Gene Name(s): Rpn2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Killer cell lectin-like receptor 3 G, H 132 Mus musculus Gene Name(s): Klra3 Ly-49c Ly49C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.221
  • Space Group: I 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 101.01 α = 90.00
b = 57.80 β = 96.15
c = 210.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-04-04
  • Released Date: 2016-07-13
  • Deposition author(s): Berry, R., Rossjohn, J.

Revision History

  • 2016-07-20
    Type: Database references
  • 2016-09-14
    Type: Database references
  • 2017-09-20
    Type: Author supporting evidence, Data collection, Database references, Derived calculations