7QVP

Human collided disome (di-ribosome) stalled on XBP1 mRNA


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

A distinct mammalian disome collision interface harbors K63-linked polyubiquitination of uS10 to trigger hRQT-mediated subunit dissociation.

Narita, M.Denk, T.Matsuo, Y.Sugiyama, T.Kikuguchi, C.Ito, S.Sato, N.Suzuki, T.Hashimoto, S.Machova, I.Tesina, P.Beckmann, R.Inada, T.

(2022) Nat Commun 13: 6411-6411

  • DOI: https://doi.org/10.1038/s41467-022-34097-9
  • Primary Citation of Related Structures:  
    7QVP

  • PubMed Abstract: 

    Translational stalling events that result in ribosome collisions induce Ribosome-associated Quality Control (RQC) in order to degrade potentially toxic truncated nascent proteins. For RQC induction, the collided ribosomes are first marked by the Hel2/ZNF598 E3 ubiquitin ligase to recruit the RQT complex for subunit dissociation. In yeast, uS10 is polyubiquitinated by Hel2, whereas eS10 is preferentially monoubiquitinated by ZNF598 in human cells for an unknown reason. Here, we characterize the ubiquitination activity of ZNF598 and its importance for human RQT-mediated subunit dissociation using the endogenous XBP1u and poly(A) translation stallers. Cryo-EM analysis of a human collided disome reveals a distinct composite interface, with substantial differences to yeast collided disomes. Biochemical analysis of collided ribosomes shows that ZNF598 forms K63-linked polyubiquitin chains on uS10, which are decisive for mammalian RQC initiation. The human RQT (hRQT) complex composed only of ASCC3, ASCC2 and TRIP4 dissociates collided ribosomes dependent on the ATPase activity of ASCC3 and the ubiquitin-binding capacity of ASCC2. The hRQT-mediated subunit dissociation requires the K63-linked polyubiquitination of uS10, while monoubiquitination of eS10 or uS10 is not sufficient. Therefore, we conclude that ZNF598 functionally marks collided mammalian ribosomes by K63-linked polyubiquitination of uS10 for the trimeric hRQT complex-mediated subunit dissociation.


  • Organizational Affiliation

    Division of RNA and gene regulation, Institute of Medical Science, The University of Tokyo, Minato-Ku, 108-8639, Japan.


Macromolecules

Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L8CB [auth MA],
M [auth LA]
257Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A8B8VPA8 (Balaenoptera musculus)
Explore A0A8B8VPA8 
Go to UniProtKB:  A0A8B8VPA8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8B8VPA8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L3DB [auth MB],
N [auth LB]
403Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P39023 (Homo sapiens)
Explore P39023 
Go to UniProtKB:  P39023
PHAROS:  P39023
GTEx:  ENSG00000100316 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP39023
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L4EB [auth MC],
O [auth LC]
427Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P36578 (Homo sapiens)
Explore P36578 
Go to UniProtKB:  P36578
PHAROS:  P36578
GTEx:  ENSG00000174444 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP36578
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L5FB [auth MD],
P [auth LD]
297Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P46777 (Homo sapiens)
Explore P46777 
Go to UniProtKB:  P46777
PHAROS:  P46777
GTEx:  ENSG00000122406 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP46777
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L6GB [auth ME],
Q [auth LE]
288Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for Q02878 (Homo sapiens)
Explore Q02878 
Go to UniProtKB:  Q02878
PHAROS:  Q02878
GTEx:  ENSG00000089009 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ02878
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L7HB [auth MF],
R [auth LF]
248Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P18124 (Homo sapiens)
Explore P18124 
Go to UniProtKB:  P18124
PHAROS:  P18124
GTEx:  ENSG00000147604 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP18124
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L7aIB [auth MG],
S [auth LG]
266Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P62424 (Homo sapiens)
Explore P62424 
Go to UniProtKB:  P62424
PHAROS:  P62424
GTEx:  ENSG00000148303 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62424
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L9JB [auth MH],
T [auth LH]
192Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P32969 (Homo sapiens)
Explore P32969 
Go to UniProtKB:  P32969
PHAROS:  P32969
GTEx:  ENSG00000163682 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP32969
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L10-likeKB [auth MI],
U [auth LI]
214Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for Q96L21 (Homo sapiens)
Explore Q96L21 
Go to UniProtKB:  Q96L21
PHAROS:  Q96L21
GTEx:  ENSG00000165496 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ96L21
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L11LB [auth MJ],
V [auth LJ]
178Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P62913 (Homo sapiens)
Explore P62913 
Go to UniProtKB:  P62913
PHAROS:  P62913
GTEx:  ENSG00000142676 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62913
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L13MB [auth ML],
W [auth LL]
211Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P26373 (Homo sapiens)
Explore P26373 
Go to UniProtKB:  P26373
PHAROS:  P26373
GTEx:  ENSG00000167526 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP26373
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L14NB [auth MM],
X [auth LM]
215Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P50914 (Homo sapiens)
Explore P50914 
Go to UniProtKB:  P50914
PHAROS:  P50914
GTEx:  ENSG00000188846 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP50914
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L15OB [auth MN],
Y [auth LN]
204Homo sapiensMutation(s): 0 
UniProt
Find proteins for L8Y0W1 (Tupaia chinensis)
Explore L8Y0W1 
Go to UniProtKB:  L8Y0W1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupL8Y0W1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L13aPB [auth MO],
Z [auth LO]
203Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P40429 (Homo sapiens)
Explore P40429 
Go to UniProtKB:  P40429
PHAROS:  P40429
GTEx:  ENSG00000142541 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP40429
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L17AA [auth LP]154Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P18621 (Homo sapiens)
Explore P18621 
Go to UniProtKB:  P18621
PHAROS:  P18621
GTEx:  ENSG00000265681 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP18621
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L18BA [auth LQ],
RB [auth MQ]
188Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for Q07020 (Homo sapiens)
Explore Q07020 
Go to UniProtKB:  Q07020
PHAROS:  Q07020
GTEx:  ENSG00000063177 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ07020
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L19CA [auth LR],
SB [auth MR]
196Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A2J8KH59 (Pan troglodytes)
Explore A0A2J8KH59 
Go to UniProtKB:  A0A2J8KH59
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2J8KH59
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L18aDA [auth LS],
TB [auth MS]
176Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for Q02543 (Homo sapiens)
Explore Q02543 
Go to UniProtKB:  Q02543
GTEx:  ENSG00000105640 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ02543
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L21EA [auth LT],
UB [auth MT]
160Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P46778 (Homo sapiens)
Explore P46778 
Go to UniProtKB:  P46778
PHAROS:  P46778
GTEx:  ENSG00000122026 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP46778
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L22FA [auth LU],
VB [auth MU]
128Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P35268 (Homo sapiens)
Explore P35268 
Go to UniProtKB:  P35268
PHAROS:  P35268
GTEx:  ENSG00000116251 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP35268
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L23GA [auth LV],
WB [auth MV]
140Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A3P9HH38 (Oryzias latipes)
Explore A0A3P9HH38 
Go to UniProtKB:  A0A3P9HH38
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A3P9HH38
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L24HA [auth LW],
XB [auth MW]
157Homo sapiensMutation(s): 0 
UniProt
Find proteins for F2X267 (Ailuropoda melanoleuca)
Explore F2X267 
Go to UniProtKB:  F2X267
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF2X267
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L23aIA [auth LX],
YB [auth MX]
156Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P62750 (Homo sapiens)
Explore P62750 
Go to UniProtKB:  P62750
PHAROS:  P62750
GTEx:  ENSG00000198242 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62750
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
KOW domain-containing proteinJA [auth LY],
ZB [auth MY]
145Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A5N3X333 (Muntiacus reevesi)
Explore A0A5N3X333 
Go to UniProtKB:  A0A5N3X333
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A5N3X333
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L27AC [auth MZ],
KA [auth LZ]
136Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A851LWS6 (Corythaeola cristata)
Explore A0A851LWS6 
Go to UniProtKB:  A0A851LWS6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A851LWS6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L27aBC [auth Ma],
LA [auth La]
148Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P46776 (Homo sapiens)
Explore P46776 
Go to UniProtKB:  P46776
PHAROS:  P46776
GTEx:  ENSG00000166441 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP46776
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L29CC [auth Mb],
MA [auth Lb]
159Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P47914 (Homo sapiens)
Explore P47914 
Go to UniProtKB:  P47914
GTEx:  ENSG00000162244 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP47914
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L30DC [auth Mc],
NA [auth Lc]
115Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P62888 (Homo sapiens)
Explore P62888 
Go to UniProtKB:  P62888
PHAROS:  P62888
GTEx:  ENSG00000156482 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62888
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L31EC [auth Md],
OA [auth Ld]
125Homo sapiensMutation(s): 0 
UniProt
Find proteins for G7NZE1 (Macaca fascicularis)
Explore G7NZE1 
Go to UniProtKB:  G7NZE1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupG7NZE1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L32FC [auth Me],
PA [auth Le]
135Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P62910 (Homo sapiens)
Explore P62910 
Go to UniProtKB:  P62910
PHAROS:  P62910
GTEx:  ENSG00000144713 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62910
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L35aGC [auth Mf],
QA [auth Lf]
110Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P18077 (Homo sapiens)
Explore P18077 
Go to UniProtKB:  P18077
PHAROS:  P18077
GTEx:  ENSG00000182899 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP18077
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L34HC [auth Mg],
RA [auth Lg]
117Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A1U7T3M5 (Carlito syrichta)
Explore A0A1U7T3M5 
Go to UniProtKB:  A0A1U7T3M5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A1U7T3M5
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L35IC [auth Mh],
SA [auth Lh]
123Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P42766 (Homo sapiens)
Explore P42766 
Go to UniProtKB:  P42766
PHAROS:  P42766
GTEx:  ENSG00000136942 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP42766
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L36JC [auth Mi],
TA [auth Li]
105Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y3U8 (Homo sapiens)
Explore Q9Y3U8 
Go to UniProtKB:  Q9Y3U8
PHAROS:  Q9Y3U8
GTEx:  ENSG00000130255 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Y3U8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L37KC [auth Mj],
UA [auth Lj]
88Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A2Y9RW09 (Trichechus manatus latirostris)
Explore A0A2Y9RW09 
Go to UniProtKB:  A0A2Y9RW09
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2Y9RW09
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L38LC [auth Mk],
VA [auth Lk]
70Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A1A7W9T9 (Iconisemion striatum)
Explore A0A1A7W9T9 
Go to UniProtKB:  A0A1A7W9T9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A1A7W9T9
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L39MC [auth Ml],
WA [auth Ll]
51Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A7N4PFJ2 (Sarcophilus harrisii)
Explore A0A7N4PFJ2 
Go to UniProtKB:  A0A7N4PFJ2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A7N4PFJ2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
Ubiquitin-60S ribosomal protein L40NC [auth Mm],
XA [auth Lm]
128Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A8C8Y9V5 (Prolemur simus)
Explore A0A8C8Y9V5 
Go to UniProtKB:  A0A8C8Y9V5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8C8Y9V5
Sequence Annotations
Expand
  • Reference Sequence

Find similar proteins by:  Sequence   |   3D Structure  

Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L41OC [auth Mn],
YA [auth Ln]
25Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P62945 (Homo sapiens)
Explore P62945 
Go to UniProtKB:  P62945
PHAROS:  P62945
GTEx:  ENSG00000229117 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62945
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L36aPC [auth Mo],
ZA [auth Lo]
106Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for J3KQN4 (Homo sapiens)
Explore J3KQN4 
Go to UniProtKB:  J3KQN4
GTEx:  ENSG00000241343 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupJ3KQN4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L37aAB [auth Lp],
QC [auth Mp]
92Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A6I9ZMF9 (Acinonyx jubatus)
Explore A0A6I9ZMF9 
Go to UniProtKB:  A0A6I9ZMF9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A6I9ZMF9
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L28BB [auth Lr],
RC [auth Mr]
137Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P46779 (Homo sapiens)
Explore P46779 
Go to UniProtKB:  P46779
PHAROS:  P46779
GTEx:  ENSG00000108107 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP46779
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L17QB [auth MP]184Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P18621 (Homo sapiens)
Explore P18621 
Go to UniProtKB:  P18621
PHAROS:  P18621
GTEx:  ENSG00000265681 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP18621
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein SABE [auth SA],
SC [auth RA]
295Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P08865 (Homo sapiens)
Explore P08865 
Go to UniProtKB:  P08865
PHAROS:  P08865
GTEx:  ENSG00000168028 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP08865
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S3aCE [auth SB],
TC [auth RB]
264Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P61247 (Homo sapiens)
Explore P61247 
Go to UniProtKB:  P61247
GTEx:  ENSG00000145425 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP61247
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S2DE [auth SC],
UC [auth RC]
293Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P15880 (Homo sapiens)
Explore P15880 
Go to UniProtKB:  P15880
PHAROS:  P15880
GTEx:  ENSG00000140988 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP15880
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S3EE [auth SD],
VC [auth RD]
243Homo sapiensMutation(s): 0 
EC: 4.2.99.18
UniProt & NIH Common Fund Data Resources
Find proteins for P23396 (Homo sapiens)
Explore P23396 
Go to UniProtKB:  P23396
PHAROS:  P23396
GTEx:  ENSG00000149273 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP23396
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S4, X isoformFE [auth SE],
WC [auth RE]
263Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P62701 (Homo sapiens)
Explore P62701 
Go to UniProtKB:  P62701
PHAROS:  P62701
GTEx:  ENSG00000198034 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62701
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S5GE [auth SF],
XC [auth RF]
204Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A6J0Y1Z7 (Odocoileus virginianus texanus)
Explore A0A6J0Y1Z7 
Go to UniProtKB:  A0A6J0Y1Z7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A6J0Y1Z7
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S6HE [auth SG],
YC [auth RG]
249Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P62753 (Homo sapiens)
Explore P62753 
Go to UniProtKB:  P62753
PHAROS:  P62753
GTEx:  ENSG00000137154 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62753
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S7IE [auth SH],
ZC [auth RH]
194Homo sapiensMutation(s): 0 
UniProt
Find proteins for P62082 (Mus musculus)
Explore P62082 
Go to UniProtKB:  P62082
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62082
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S8AD [auth RI],
JE [auth SI]
208Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P62241 (Homo sapiens)
Explore P62241 
Go to UniProtKB:  P62241
PHAROS:  P62241
GTEx:  ENSG00000142937 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62241
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S9BD [auth RJ],
KE [auth SJ]
194Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A6J0B498 (Vicugna pacos)
Explore A0A6J0B498 
Go to UniProtKB:  A0A6J0B498
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A6J0B498
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S10CD [auth RK],
LE [auth SK]
165Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P46783 (Homo sapiens)
Explore P46783 
Go to UniProtKB:  P46783
PHAROS:  P46783
GTEx:  ENSG00000124614 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP46783
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S11DD [auth RL],
ME [auth SL]
158Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A8B8VW69 (Balaenoptera musculus)
Explore A0A8B8VW69 
Go to UniProtKB:  A0A8B8VW69
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8B8VW69
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S13ED [auth RN],
NE [auth SN]
151Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A663F1C0 (Aquila chrysaetos chrysaetos)
Explore A0A663F1C0 
Go to UniProtKB:  A0A663F1C0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A663F1C0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S14FD [auth RO],
OE [auth SO]
151Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A7L0BEC6 (Spizaetus tyrannus)
Explore A0A7L0BEC6 
Go to UniProtKB:  A0A7L0BEC6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A7L0BEC6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S15GD [auth RP],
PE [auth SP]
145Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A2K6QL61 (Rhinopithecus roxellana)
Explore A0A2K6QL61 
Go to UniProtKB:  A0A2K6QL61
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K6QL61
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S16HD [auth RQ],
QE [auth SQ]
146Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A4W2HV66 (Bos indicus x Bos taurus)
Explore A0A4W2HV66 
Go to UniProtKB:  A0A4W2HV66
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4W2HV66
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S17ID [auth RR],
RE [auth SR]
135Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P08708 (Homo sapiens)
Explore P08708 
Go to UniProtKB:  P08708
PHAROS:  P08708
GTEx:  ENSG00000182774 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP08708
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S18JD [auth RS],
SE [auth SS]
152Homo sapiensMutation(s): 0 
UniProt
Find proteins for H0WTR0 (Otolemur garnettii)
Explore H0WTR0 
Go to UniProtKB:  H0WTR0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupH0WTR0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S19KD [auth RT],
TE [auth ST]
145Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A2Y9E7Q1 (Trichechus manatus latirostris)
Explore A0A2Y9E7Q1 
Go to UniProtKB:  A0A2Y9E7Q1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2Y9E7Q1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S20LD [auth RU],
UE [auth SU]
119Homo sapiensMutation(s): 0 
UniProt
Find proteins for P60868 (Rattus norvegicus)
Explore P60868 
Go to UniProtKB:  P60868
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60868
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S21MD [auth RV],
VE [auth SV]
83Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P63220 (Homo sapiens)
Explore P63220 
Go to UniProtKB:  P63220
PHAROS:  P63220
GTEx:  ENSG00000171858 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP63220
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S15aND [auth RW],
WE [auth SW]
130Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A2K5QKS6 (Cebus imitator)
Explore A0A2K5QKS6 
Go to UniProtKB:  A0A2K5QKS6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K5QKS6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S23OD [auth RX],
XE [auth SX]
143Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A340WVW7 (Lipotes vexillifer)
Explore A0A340WVW7 
Go to UniProtKB:  A0A340WVW7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A340WVW7
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S24PD [auth RY],
YE [auth SY]
133Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P62847 (Homo sapiens)
Explore P62847 
Go to UniProtKB:  P62847
PHAROS:  P62847
GTEx:  ENSG00000138326 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62847
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S25QD [auth RZ],
ZE [auth SZ]
125Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A6J3IG71 (Sapajus apella)
Explore A0A6J3IG71 
Go to UniProtKB:  A0A6J3IG71
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A6J3IG71
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S26AF [auth Sa],
RD [auth Ra]
101Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A6J2NCX2 (Phyllostomus discolor)
Explore A0A6J2NCX2 
Go to UniProtKB:  A0A6J2NCX2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A6J2NCX2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S27BF [auth Sb],
SD [auth Rb]
84Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A7J8BG50 (Rousettus aegyptiacus)
Explore A0A7J8BG50 
Go to UniProtKB:  A0A7J8BG50
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A7J8BG50
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S28CF [auth Sc],
TD [auth Rc]
69Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A3M0JHZ8 (Hirundo rustica rustica)
Explore A0A3M0JHZ8 
Go to UniProtKB:  A0A3M0JHZ8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A3M0JHZ8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 80
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S29DF [auth Sd],
UD [auth Rd]
56Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A2J8WKD7 (Pongo abelii)
Explore A0A2J8WKD7 
Go to UniProtKB:  A0A2J8WKD7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2J8WKD7
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 81
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S30EF [auth Se],
VD [auth Re]
59Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A2K6U587 (Saimiri boliviensis boliviensis)
Explore A0A2K6U587 
Go to UniProtKB:  A0A2K6U587
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K6U587
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 82
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S12WD [auth Rf]132Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A671DUR2 (Rhinolophus ferrumequinum)
Explore A0A671DUR2 
Go to UniProtKB:  A0A671DUR2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A671DUR2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 83
MoleculeChains Sequence LengthOrganismDetailsImage
Receptor of activated protein C kinase 1FF [auth Sg],
XD [auth Rg]
317Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A2K6K8B0 (Rhinopithecus bieti)
Explore A0A2K6K8B0 
Go to UniProtKB:  A0A2K6K8B0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2K6K8B0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 84
MoleculeChains Sequence LengthOrganismDetailsImage
Ubiquitin-40S ribosomal protein S27aYD [auth Rh]156Homo sapiensMutation(s): 0 
UniProt
Find proteins for A0A8C0T835 (Canis lupus familiaris)
Explore A0A8C0T835 
Go to UniProtKB:  A0A8C0T835
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8C0T835
Sequence Annotations
Expand
  • Reference Sequence

Find similar nucleic acids by:  Sequence   |   3D Structure  

Entity ID: 1
MoleculeChains LengthOrganismImage
mRNAA [auth A4]14Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence

Find similar nucleic acids by:  Sequence   |   3D Structure  

Entity ID: 2
MoleculeChains LengthOrganismImage
mRNAB [auth A5]11Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains LengthOrganismImage
tRNA P/PC [auth B4],
F [auth D5]
76Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 4
MoleculeChains LengthOrganismImage
tRNA P/ED [auth B5]75Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 5
MoleculeChains LengthOrganismImage
tNRA E/EE [auth CC]75Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 6
MoleculeChains LengthOrganismImage
5.8S ribosomal RNAG [auth L1],
K [auth L8]
157Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 7
MoleculeChains LengthOrganismImage
28S ribosomal RNAH [auth L5],
I [auth L6]
5,227Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 8
MoleculeChains LengthOrganismImage
5S ribosomal RNAJ [auth L7],
L [auth L9]
121Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 85
MoleculeChains LengthOrganismImage
18S ribosomal RNAAE [auth S3],
ZD [auth S2]
1,869Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research Foundation (DFG)GermanyBE1814/15-1

Revision History  (Full details and data files)

  • Version 1.0: 2022-10-12
    Type: Initial release
  • Version 1.1: 2022-11-23
    Changes: Database references