7KQD

Prefusion RSV F Bound to RV521


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.94 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.208 

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Ligand Structure Quality Assessment 


This is version 1.2 of the entry. See complete history


Literature

Discovery of Sisunatovir (RV521), an Inhibitor of Respiratory Syncytial Virus Fusion.

Cockerill, G.S.Angell, R.M.Bedernjak, A.Chuckowree, I.Fraser, I.Gascon-Simorte, J.Gilman, M.S.A.Good, J.A.D.Harland, R.Johnson, S.M.Ludes-Meyers, J.H.Littler, E.Lumley, J.Lunn, G.Mathews, N.McLellan, J.S.Paradowski, M.Peeples, M.E.Scott, C.Tait, D.Taylor, G.Thom, M.Thomas, E.Villalonga Barber, C.Ward, S.E.Watterson, D.Williams, G.Young, P.Powell, K.

(2021) J Med Chem 64: 3658-3676

  • DOI: https://doi.org/10.1021/acs.jmedchem.0c01882
  • Primary Citation of Related Structures:  
    7KQD

  • PubMed Abstract: 

    RV521 is an orally bioavailable inhibitor of respiratory syncytial virus (RSV) fusion that was identified after a lead optimization process based upon hits that originated from a physical property directed hit profiling exercise at Reviral. This exercise encompassed collaborations with a number of contract organizations with collaborative medicinal chemistry and virology during the optimization phase in addition to those utilized as the compound proceeded through preclinical and clinical evaluation. RV521 exhibited a mean IC 50 of 1.2 nM against a panel of RSV A and B laboratory strains and clinical isolates with antiviral efficacy in the Balb/C mouse model of RSV infection. Oral bioavailability in preclinical species ranged from 42 to >100% with evidence of highly efficient penetration into lung tissue. In healthy adult human volunteers experimentally infected with RSV, a potent antiviral effect was observed with a significant reduction in viral load and symptoms compared to placebo.


  • Organizational Affiliation

    Reviral Ltd., Stevenage Bioscience Catalyst, Gunnels Wood Road, Stevenage, Hertfordshire SG1 2FX, U.K.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Fusion glycoprotein F0A [auth F]568Respiratory syncytial virusMutation(s): 0 
UniProt
Find proteins for C3UPB8 (Respiratory syncytial virus)
Explore C3UPB8 
Go to UniProtKB:  C3UPB8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupC3UPB8
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.94 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.208 
  • Space Group: P 41 3 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 168.61α = 90
b = 168.61β = 90
c = 168.61γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
MOSFLMdata reduction
Aimlessdata scaling
PHASERphasing
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2021-04-21
    Type: Initial release
  • Version 1.1: 2021-11-17
    Changes: Database references, Structure summary
  • Version 1.2: 2023-10-18
    Changes: Data collection, Refinement description