7D11

Solution structure of a WKRY DNA-binding domain

• PDB DOI: https://doi.org/10.2210/pdb7D11/pdb

• Classification: TRANSCRIPTION
• Organism(s): Arabidopsis thaliana
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2020-09-12 Released: 2021-09-15 
• Deposition Author(s): Li, Q.W., Hu, Y.F., Jin, C.W.
• Funding Organization(s): National Basic Research Program of China (973 Program)

---

Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

Structure of a WKRY DNA-binding domain

Li, Q.W., Hu, Y.F., Jin, C.W.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 9.66 kDa 
• Atom Count: 641 
• Modelled Residue Count: 79 
• Deposited Residue Count: 83 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
WRKY transcription factor 1	A	83	Arabidopsis thaliana	Mutation(s): 0  Gene Names: WRKY1, ZAP1, At2g04880, F1O13.1, F28I8.34
UniProt
Find proteins for Q9SI37 (Arabidopsis thaliana) Explore Q9SI37  Go to UniProtKB:  Q9SI37

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2021-09-15 
Deposition Author(s): Li, Q.W., Hu, Y.F., Jin, C.W.

---

Funding Organization	Location	Grant Number
National Basic Research Program of China (973 Program)	China	2016YFA0501201

Revision History  

• Version 1.0: 2021-09-15
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Other