Structure of canine MHC class I at 2.7 Angstroms resolution
Sun, Y.J., Ma, L.Z., Li, S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
MHC class I DLA-88 | 275 | Canis lupus familiaris | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for O46882 (Canis lupus familiaris) Explore O46882  Go to UniProtKB:  O46882 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O46882 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-2-microglobulin | 99 | Canis lupus familiaris | Mutation(s): 0  Gene Names: B2M | ||
UniProt | |||||
Find proteins for E2RN10 (Canis lupus familiaris) Explore E2RN10  Go to UniProtKB:  E2RN10 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | E2RN10 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ARG-THR-ILE-SER-TYR-THR-TYR-PRO-PHE | 9 | Canine distemper virus strain Onderstepoort | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for P24306 (Canine distemper virus (strain Onderstepoort)) Explore P24306  Go to UniProtKB:  P24306 | |||||
Entity Groups   | |||||
UniProt Group | P24306 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 89.167 | α = 90 |
b = 92.837 | β = 90 |
c = 119.244 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
REFMAC | phasing |
Funding Organization | Location | Grant Number |
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National Natural Science Foundation of China (NSFC) | China | 319 726 83 |