Zinc-persulfide complex for sulfur mobilization by SufU in SUF-like machinery for Fe-S cluster biosynthesis
Fujishiro, T., Terahata, T., Shimada, Y., Takahashi, Y.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Zinc-dependent sulfurtransferase SufU | 155 | Bacillus subtilis subsp. subtilis str. 168 | Mutation(s): 0  Gene Names: sufU, iscU, nifU, yurV, BSU32680 EC: 2 | ||
UniProt | |||||
Find proteins for O32163 (Bacillus subtilis (strain 168)) Explore O32163  Go to UniProtKB:  O32163 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O32163 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Zinc-dependent sulfurtransferase SufU | 155 | Bacillus subtilis subsp. subtilis str. 168 | Mutation(s): 0  Gene Names: sufU, iscU, nifU, yurV, BSU32680 EC: 2 | ||
UniProt | |||||
Find proteins for O32163 (Bacillus subtilis (strain 168)) Explore O32163  Go to UniProtKB:  O32163 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O32163 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN (Subject of Investigation/LOI) Query on ZN | E [auth A], F [auth B], G [auth C], H [auth D] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
CSS Query on CSS | C, D | L-PEPTIDE LINKING | C3 H7 N O2 S2 | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 146.69 | α = 90 |
b = 35.52 | β = 96.41 |
c = 105.22 | γ = 90 |
Software Name | Purpose |
---|---|
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Japan Society for the Promotion of Science | Japan | 17K14510 |