K1U bound crystal structure of class II peptide deformylase from methicillin resistant Staphylococcus aureus
Lee, I.H., Ho, T.H., Kang, L.W.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptide deformylase | 183 | Staphylococcus aureus | Mutation(s): 0  Gene Names: def, def1, pdf1 EC: 3.5.1.88 | ||
UniProt | |||||
Find proteins for P68826 (Staphylococcus aureus) Explore P68826  Go to UniProtKB:  P68826 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P68826 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
K1U (Subject of Investigation/LOI) Query on K1U | C [auth A] | (3R)-3-benzyl-4-oxo-4-[(2-oxo-2-phenylethyl)sulfanyl]butanoic acid C19 H18 O4 S XBDWLLDIBQGWMW-MRXNPFEDSA-N | |||
NI Query on NI | B [auth A] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 96.908 | α = 90 |
b = 120.32 | β = 90 |
c = 47.571 | γ = 90 |
Software Name | Purpose |
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HKL-2000 | data scaling |
REFMAC | refinement |
HKL-2000 | data collection |
HKL-2000 | data reduction |
MOLREP | phasing |