6HJ7

The NMR structure of NRADD death domain

• PDB DOI: https://doi.org/10.2210/pdb6HJ7/pdb

• Classification: MEMBRANE PROTEIN
• Organism(s): Mus musculus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2018-09-01 Released: 2019-05-08 
• Deposition Author(s): Nadezhdin, K.D., Mineev, K.S., Goncharuk, S.A., Arseniev, A.S.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 2000 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Literature

NMR structure of a full-length single-pass membrane protein NRADD.

Nadezhdin, K.D., Goncharuk, S.A., Arseniev, A.S., Mineev, K.S.

(2019) Proteins 87: 786-790

• PubMed: 31033000 
• DOI: https://doi.org/10.1002/prot.25703
• Primary Citation of Related Structures:  
  6HJ7


• PubMed Abstract: 
  

  Structural study of any single-pass membrane protein is both an important and challenging task. In this report, we present the structure of a neurotrophin receptor-alike death-domain protein. The structure and dynamics of the protein was investigated by conventional nuclear magnetic resonance techniques in the solution of phospholipid bicelles. The receptor contains two folded regions-α-helical transmembrane domain and globular C-terminal death domain with more than 50% of the rest of backbone being disordered. This is the first structure of a full-length single-pass membrane receptor-alike protein solved by the single method.

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Organizational Affiliation: 

Laboratory of biomolecular NMR spectroscopy, Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, Moscow, Russia.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 26.66 kDa 
• Atom Count: 784 
• Modelled Residue Count: 102 
• Deposited Residue Count: 246 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Death domain-containing membrane protein NRADD	A	246	Mus musculus	Mutation(s): 0  Gene Names: Nradd
UniProt
Find proteins for Q8CJ26 (Mus musculus) Explore Q8CJ26  Go to UniProtKB:  Q8CJ26

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 2000 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2019-05-08 
Deposition Author(s): Nadezhdin, K.D., Mineev, K.S., Goncharuk, S.A., Arseniev, A.S.

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Funding Organization	Location	Grant Number
	Russian Federation	14-14-00573

Revision History  

• Version 1.0: 2019-05-08
  Type: Initial release
  
• Version 1.1: 2019-08-14
  Changes: Data collection, Database references
• Version 2.0: 2019-10-23
  Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Non-polymer description, Polymer sequence, Source and taxonomy, Structure summary
• Version 2.1: 2023-06-14
  Changes: Database references, Other