Yersinia YscU C-terminal fragment in complex with a synthetic compound
Karlberg, T., Thorsell, A.G., Ho, O., Sunduru, N., Elofsson, M., Wolf-Watz, M., Schuler, H.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Yop proteins translocation protein U | A, C [auth B] | 58 | Yersinia pestis | Mutation(s): 0  Gene Names: yscU, YPCD1.47, y5031, y0034, YP_pCD36 | |
UniProt | |||||
Find proteins for P69986 (Yersinia pestis) Explore P69986  Go to UniProtKB:  P69986 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P69986 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Yop proteins translocation protein U | B [auth C], D | 91 | Yersinia pestis | Mutation(s): 0  Gene Names: yscU, YPCD1.47, y5031, y0034, YP_pCD36 | |
UniProt | |||||
Find proteins for P69986 (Yersinia pestis) Explore P69986  Go to UniProtKB:  P69986 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P69986 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
B8E Query on B8E | G [auth C], K [auth D] | methyl 2-(5-methyl-2-phenyl-1,3-thiazol-4-yl)ethanoate C13 H13 N O2 S IGRGQWSVDTYHID-UHFFFAOYSA-N | |||
PO4 Query on PO4 | E [auth A], H [auth C], J [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
CL Query on CL | F [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
NA Query on NA | I [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 53.74 | α = 90 |
b = 69.65 | β = 90 |
c = 242.67 | γ = 90 |
Software Name | Purpose |
---|---|
BUSTER | refinement |
XDS | data reduction |
SCALA | data scaling |
BALBES | phasing |