6C8U

Solution structure of Musashi2 RRM1

  • Classification: RNA BINDING PROTEIN
  • Organism(s): Homo sapiens
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2018-01-25 Released: 2019-01-30 
  • Deposition Author(s): Xing, M., Lan, L., Douglas, J.T., Gao, P., Hanzlik, R.P., Xu, L.
  • Funding Organization(s): National Institutes of Health/National Cancer Institute (NIH/NCI), National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), Department of Defense Breast Cancer Research Program Breakthrough Level II, Kansas Bioscience Authority Rising Star Award (to LX)

Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report

Currently 6C8U does not have a validation slider image.


This is version 1.4 of the entry. See complete history


Literature

Crystal and solution structures of human oncoprotein Musashi-2 N-terminal RNA recognition motif 1.

Lan, L.Xing, M.Kashipathy, M.Douglas, J.Gao, P.Battaile, K.Hanzlik, R.Lovell, S.Xu, L.

(2019) Proteins 

  • DOI: https://doi.org/10.1002/prot.25836
  • Primary Citation of Related Structures:  
    6C8U, 6NTY

  • PubMed Abstract: 

    Musashi-2 (MSI2) belongs to Musashi family of RNA binding proteins (RBP). Like Musashi-1 (MSI1), it is overexpressed in a variety of cancers and is a promising therapeutic target. Both MSI proteins contain two N-terminal RNA recognition motifs and play roles in posttranscriptional regulation of target mRNAs. Previously, we have identified several inhibitors of MSI1, all of which bind to MSI2 as well. In order to design MSI2-specific inhibitors and compare the differences of binding mode of the inhibitors, we set out to solve the structure of MSI2-RRM1, the key motif that is responsible for the binding. Here, we report the crystal structure and the first NMR solution structure of MSI2-RRM1, and compare these to the structures of MSI1-RBD1 and other RBPs. A high degree of structural similarity was observed between the crystal and solution NMR structures. MSI2-RRM1 shows a highly similar overall folding topology to MSI1-RBD1 and other RBPs. The structural information of MSI2-RRM1 will be helpful for understanding MSI2-RNA interaction and for guiding rational drug design of MSI2-specific inhibitors.


  • Organizational Affiliation

    Department of Molecular Biosciences, The University of Kansas, Lawrence, Kansas.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
RNA-binding protein Musashi homolog 2A [auth 1]115Homo sapiensMutation(s): 0 
Gene Names: MSI2
UniProt & NIH Common Fund Data Resources
Find proteins for Q96DH6 (Homo sapiens)
Explore Q96DH6 
Go to UniProtKB:  Q96DH6
PHAROS:  Q96DH6
GTEx:  ENSG00000153944 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ96DH6
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report

Currently 6C8U does not have a validation slider image.



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Cancer Institute (NIH/NCI)United StatesCA178831
National Institutes of Health/National Cancer Institute (NIH/NCI)United StatesCA191785
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM110761
Department of Defense Breast Cancer Research Program Breakthrough Level IIUnited StatesBC151845
Kansas Bioscience Authority Rising Star Award (to LX)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2019-01-30
    Type: Initial release
  • Version 1.1: 2019-02-20
    Changes: Author supporting evidence, Data collection
  • Version 1.2: 2019-11-06
    Changes: Data collection, Database references
  • Version 1.3: 2019-12-04
    Changes: Author supporting evidence
  • Version 1.4: 2022-03-23
    Changes: Author supporting evidence, Database references