Structure of AtmM Bound with Glycosylated Indolocarbazole
Alvarado, S.K., Miller, M.D., Wang, Z., Thorson, J.S., Phillips Jr., G.N.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
D-glucose O-methyltransferase | 268 | Actinomadura melliaura | Mutation(s): 0  Gene Names: atM | ||
UniProt | |||||
Find proteins for Q0H2W9 (Actinomadura melliaura) Explore Q0H2W9  Go to UniProtKB:  Q0H2W9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q0H2W9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
BY9 (Subject of Investigation/LOI) Query on BY9 | E [auth A], G [auth B], I [auth C] | 12-beta-D-glucopyranosyl-12,13-dihydro-5H-indolo[2,3-a]pyrrolo[3,4-c]carbazole-5,7(6H)-dione C26 H21 N3 O7 FAKJOUAYZNXZGV-QCUUGYDUSA-N | |||
SAH (Subject of Investigation/LOI) Query on SAH | D [auth A], F [auth B], H [auth C] | S-ADENOSYL-L-HOMOCYSTEINE C14 H20 N6 O5 S ZJUKTBDSGOFHSH-WFMPWKQPSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 61.59 | α = 90 |
b = 129.05 | β = 90 |
c = 129.64 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
Aimless | data scaling |
PHASER | phasing |
PDB_EXTRACT | data extraction |
XDS | data reduction |
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Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R01 GM115261 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | U01 GM098248 |
National Science Foundation (NSF, United States) | United States | STC 1231306 |