Polymorphisms in the VapBC toxin:antitoxin system mediate high frequency plasmid loss in Shigella sonnei
Martyn, J.E., Pilla, G., Hollingshead, S., Lea, S.M., McVicker, G., Tang, C.M.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Antitoxin | 75 | Shigella sonnei | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
tRNA(fMet)-specific endonuclease VapC | 152 | Shigella sonnei | Mutation(s): 0  Gene Names: vapC, BZ172_30265 EC: 3.1 | ||
UniProt | |||||
Find proteins for A0A0H9P9N5 (Shigella sonnei) Explore A0A0H9P9N5  Go to UniProtKB:  A0A0H9P9N5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0H9P9N5 | ||||
Sequence AnnotationsExpand | |||||
|
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 95.873 | α = 90 |
b = 95.873 | β = 90 |
c = 116.389 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
DIALS | data reduction |
DIALS | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Wellcome Trust | United Kingdom | 102908/Z/13/Z |