Structure of the mixed-valence, active form, of cytochrome c peroxidase from obligate human pathogenic bacterium Neisseria gonorrhoeae
Carvalho, A.L., Romao, M.J., Pauleta, S., Nobrega, C.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytochrome-c peroxidase | 329 | Neisseria gonorrhoeae | Mutation(s): 0  Gene Names: ccpA, E8M64_00570, ERS135259_00627, NCTC13484_01765 EC: 1.11.1.5 | ||
UniProt | |||||
Find proteins for Q5F5Z9 (Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)) Explore Q5F5Z9  Go to UniProtKB:  Q5F5Z9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5F5Z9 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HEC (Subject of Investigation/LOI) Query on HEC | C [auth A], D [auth A], G [auth B], H [auth B] | HEME C C34 H34 Fe N4 O4 HXQIYSLZKNYNMH-LJNAALQVSA-N | |||
AZI Query on AZI | F [auth A], J [auth B] | AZIDE ION N3 IVRMZWNICZWHMI-UHFFFAOYSA-N | |||
CA Query on CA | E [auth A], I [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 79.12 | α = 90 |
b = 89.14 | β = 90 |
c = 94.83 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
PDB_EXTRACT | data extraction |
MOSFLM | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Fundacao para a Ciencia e a Tecnologia | Portugal | RECI/BBB-BEP/0124/2012 |
Fundacao para a Ciencia e a Tecnologia | Portugal | PTDC/BIA-BQM/29442/2017 |