Crystal Structure of Human Mucin-like Protocadherin EC1-2
Gray, M.E., Johnson, Z.R., Modak, D., Sotomayor, M.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Mucin-like protocadherin | 215 | Homo sapiens | Mutation(s): 0  Gene Names: MUPCDH | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9HBB8 (Homo sapiens) Explore Q9HBB8  Go to UniProtKB:  Q9HBB8 | |||||
PHAROS:  Q9HBB8 GTEx:  ENSG00000099834  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9HBB8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TRS Query on TRS | B [auth A] | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O | |||
CA (Subject of Investigation/LOI) Query on CA | C [auth A], D [auth A], E [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 50.427 | α = 90 |
b = 78.379 | β = 90 |
c = 121.39 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) | United States | DK095811 |