Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase in complex with glutamic acid linked compound 10
Thompson, A.P., Polyak, S.W., Wegener, K.L., Bruning, J.B.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ATP-dependent dethiobiotin synthetase BioD | 233 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0  Gene Names: bioD, Rv1570, MTCY336.33c EC: 6.3.3.3 | ||
UniProt | |||||
Find proteins for P9WPQ5 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WPQ5  Go to UniProtKB:  P9WPQ5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P9WPQ5 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
L6M (Subject of Investigation/LOI) Query on L6M | F [auth A], J [auth D] | 5'-{[N-({(1S,2R)-2-[4-(carboxymethyl)benzene-1-carbonyl]cyclopentyl}acetyl)-L-gamma-glutamyl]amino}-2',5'-dideoxycytidine C30 H37 N5 O10 JVRVDICAIPFWFZ-BONAQRLYSA-N | |||
CIT (Subject of Investigation/LOI) Query on CIT | E [auth A], G [auth B], H [auth C], I [auth D] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 54.712 | α = 90 |
b = 104.614 | β = 90 |
c = 153.628 | γ = 90 |
Software Name | Purpose |
---|---|
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
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National Health and Medical Research Council (NHMRC, Australia) | Australia | APP1068885 |