6NOT

Crystal structure of a full length elongation factor G (EF-G) from Rickettsia prowazekii

• PDB DOI: https://doi.org/10.2210/pdb6NOT/pdb

• Classification: TRANSLATION
• Organism(s): Rickettsia prowazekii str. Madrid E
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2019-01-16 Released: 2019-01-30 
• Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.40 Å
• R-Value Free: 0.244 
• R-Value Work: 0.197 
• R-Value Observed: 0.200 

Literature

Crystal structure of a full length elongation factor G (EF-G) from Rickettsia prowazekii

Edwards, T.E., Dranow, D.M., Lorimer, D.D., Horanyi, P.S., Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 157.75 kDa 
• Atom Count: 9,355 
• Modelled Residue Count: 1,266 
• Deposited Residue Count: 1,414 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Elongation factor G	A, B	707	Rickettsia prowazekii str. Madrid E	Mutation(s): 0  Gene Names: fusA, RP132
UniProt
Find proteins for P41084 (Rickettsia prowazekii (strain Madrid E)) Explore P41084  Go to UniProtKB:  P41084

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.40 Å
• R-Value Free: 0.244 
• R-Value Work: 0.197 
• R-Value Observed: 0.200 
• Space Group: P 1
• Diffraction Data: https://doi.org/10.18430/m36not

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 57.67	α = 103.85
b = 79.56	β = 95.32
c = 95.47	γ = 92.17

Software Package:

Software Name	Purpose
XDS	data reduction
XSCALE	data scaling
MOLREP	phasing
PHENIX	refinement
PDB_EXTRACT	data extraction

Structure Validation

Currently 6NOT does not have a validation slider image.

Entry History 

Deposition Data

• Released Date: 2019-01-30 
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History  

• Version 1.0: 2019-01-30
  Type: Initial release
  
• Version 1.1: 2023-10-11
  Changes: Data collection, Database references, Refinement description