A hyperthermophilic cellobiohydrolase mined from a hot spring metagenomic data
Takeda, M., Baba, S., Okuma, J., Hirose, Y., Nishimura, A., Takata, M., Oda, K., Shibata, D., Kondo, Y., Kumasaka, T.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glucanase | 428 | Ardenticatenia bacterium | Mutation(s): 0  Gene Names: D6802_06765 EC: 3.2.1 | ||
UniProt | |||||
Find proteins for A0A4Y1YS11 (uncultured Chloroflexota bacterium) Explore A0A4Y1YS11  Go to UniProtKB:  A0A4Y1YS11 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A4Y1YS11 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | D, E, F | 7 | N/A | ||
Glycosylation Resources | |||||
GlyTouCan:  G73749NK GlyCosmos:  G73749NK GlyGen:  G73749NK |
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MG (Subject of Investigation/LOI) Query on MG | G [auth A] H [auth A] I [auth B] J [auth B] K [auth C] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 173.949 | α = 90 |
b = 140.01 | β = 101.06 |
c = 110.578 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
MOLREP | phasing |