The role of DNA flexibility in transcription regulator AmtR-DNA interaction
Schwab, C., Sevvana, M., Seidel, G., Sandmann, A., Grau, F.C., Muller, Y.A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
AmtR protein | 202 | Corynebacterium glutamicum | Mutation(s): 0  Gene Names: amtR | ||
UniProt | |||||
Find proteins for Q79VH8 (Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025)) Explore Q79VH8  Go to UniProtKB:  Q79VH8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q79VH8 | ||||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*GP*TP*CP*TP*AP*TP*AP*GP*AP*TP*CP*GP*AP*TP*AP*GP*AP*C)-3') | 18 | Corynebacterium glutamicum | |||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*GP*TP*CP*TP*AP*TP*CP*GP*AP*TP*CP*TP*AP*TP*AP*GP*AP*C)-3') | 18 | Corynebacterium glutamicum | |||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 63.32 | α = 90 |
b = 76.15 | β = 90 |
c = 117.4 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PDB_EXTRACT | data extraction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
German Research Foundation | Germany | SPP1395 |