Crystal structure of TAF3 PHD finger bound to H3K4me3Q5ser
Zhao, S., Zhang, B., Li, H.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Transcription initiation factor TFIID subunit 3 | 63 | Homo sapiens | Mutation(s): 1  Gene Names: TAF3 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q5VWG9 (Homo sapiens) Explore Q5VWG9  Go to UniProtKB:  Q5VWG9 | |||||
PHAROS:  Q5VWG9 GTEx:  ENSG00000165632  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5VWG9 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Histone peptide H3(1-15)K4me3Q5ser | B [auth P], D | 7 | synthetic construct | Mutation(s): 0  | |
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN Query on ZN | E [auth A], F [auth A], G [auth C], H [auth C] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
M3L Query on M3L | B [auth P], D | L-PEPTIDE LINKING | C9 H21 N2 O2 | LYS |
Length ( Å ) | Angle ( ˚ ) |
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a = 26.982 | α = 90 |
b = 48.096 | β = 98.16 |
c = 52.7 | γ = 90 |
Software Name | Purpose |
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HKL-2000 | data collection |
HKL-2000 | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHENIX | phasing |
HKL | data reduction |
HKL | data scaling |