5T0Y

2A10 Antibody FAB fragment

PDB DOI: https://doi.org/10.2210/pdb5T0Y/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus musculus
Expression System: Mus musculus
Mutation(s): No

Deposited: 2016-08-17 Released: 2017-06-21
Deposition Author(s): Jackson, C.J., Fisher, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.01 Å
R-Value Free: 0.247
R-Value Work: 0.225
R-Value Observed: 0.226

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Restricted antibody diversity and low affinity limit antibody responses to the Plasmodium circumsporozoite protein

Jackson, C.J., Cockburn, I.

To be published.

Macromolecule Content

Total Structure Weight: 141.94 kDa
Atom Count: 9,970
Modelled Residue Count: 1,286
Deposited Residue Count: 1,287
Unique protein chains: 2

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
2A10 FAB fragment light chain	A [auth L], C [auth B], E [auth G]	212	Mus musculus	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
2A10 FAB fragment heavy chain	B [auth H], D [auth A], F [auth I]	217	Mus musculus	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SO4 Query on SO4 Download Ideal Coordinates CCD File SDF format, chain G [auth L] SDF format, chain H [auth L] SDF format, chain I [auth H] SDF format, chain J [auth H] SDF format, chain K [auth B] SDF format, chain L [auth B] SDF format, chain M [auth B] SDF format, chain N [auth B] SDF format, chain O [auth A] SDF format, chain P [auth A] SDF format, chain Q [auth G] SDF format, chain R [auth I] SDF format, chain S [auth I] SDF format, chain T [auth I] SDF format, chain U [auth I] SDF format, chain V [auth I] SDF format, chain W [auth I] SDF format, chain X [auth I] MOL2 format, chain G [auth L] MOL2 format, chain H [auth L] MOL2 format, chain I [auth H] MOL2 format, chain J [auth H] MOL2 format, chain K [auth B] MOL2 format, chain L [auth B] MOL2 format, chain M [auth B] MOL2 format, chain N [auth B] MOL2 format, chain O [auth A] MOL2 format, chain P [auth A] MOL2 format, chain Q [auth G] MOL2 format, chain R [auth I] MOL2 format, chain S [auth I] MOL2 format, chain T [auth I] MOL2 format, chain U [auth I] MOL2 format, chain V [auth I] MOL2 format, chain W [auth I] MOL2 format, chain X [auth I]	G [auth L] H [auth L] I [auth H] J [auth H] K [auth B] G [auth L], H [auth L], I [auth H], J [auth H], K [auth B], L [auth B], M [auth B], N [auth B], O [auth A], P [auth A], Q [auth G], R [auth I], S [auth I], T [auth I], U [auth I], V [auth I], W [auth I], X [auth I]	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Interactions Focus chain G [auth L] Focus chain H [auth L] Focus chain I [auth H] Focus chain J [auth H] Focus chain K [auth B] Focus chain L [auth B] Focus chain M [auth B] Focus chain N [auth B] Focus chain O [auth A] Focus chain P [auth A] Focus chain Q [auth G] Focus chain R [auth I] Focus chain S [auth I] Focus chain T [auth I] Focus chain U [auth I] Focus chain V [auth I] Focus chain W [auth I] Focus chain X [auth I] Interactions & Density Focus chain G [auth L] Focus chain H [auth L] Focus chain I [auth H] Focus chain J [auth H] Focus chain K [auth B] Focus chain L [auth B] Focus chain M [auth B] Focus chain N [auth B] Focus chain O [auth A] Focus chain P [auth A] Focus chain Q [auth G] Focus chain R [auth I] Focus chain S [auth I] Focus chain T [auth I] Focus chain U [auth I] Focus chain V [auth I] Focus chain W [auth I] Focus chain X [auth I]