5OV9

Crystal structure of Acetylcholinesterase in complex with Crystal Violet


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.195
  • R-Value Work: 0.159

Literature

Macromolecules
Sequence Display for 5OV9

Classification: HYDROLASE

Total Structure Weight: 123904.32

Macromolecule Entities
Molecule Chains Length Organism Details
Acetylcholinesterase A, B 548 Mus musculus EC#: 3.1.1.7 IUBMB
Details: Fragment: CATALYTIC DOMAIN, UNP RESIDUES 32-574
Gene Name(s): Ache
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 9 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CVI
Query on CVI

A, B CRYSTAL VIOLET
C25 H30 N3
LGLFFNDHMLKUMI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PE4
Query on PE4

B 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]- ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL
POLYETHYLENE GLYCOL PEG4000 (Synonym)
C16 H34 O8
PJWQOENWHPEPKI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PGE
Query on PGE

B TRIETHYLENE GLYCOL
C6 H14 O4
ZIBGPFATKBEMQZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
AE3
Query on AE3

B 2-(2-ETHOXYETHOXY)ETHANOL
C6 H14 O3
XXJWXESWEXIICW-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PG0
Query on PG0

A 2-(2-METHOXYETHOXY)ETHANOL
PEG 6000 (Synonym)
C5 H12 O3
SBASXUCJHJRPEV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PEG
Query on PEG

B DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ETX
Query on ETX

A, B 2-ETHOXYETHANOL
C4 H10 O2
ZNQVEEAIQZEUHB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.195
  • R-Value Work: 0.159
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 79.63 α = 90.00
b = 113.89 β = 90.00
c = 226.67 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-08-28
  • Released Date: 2017-09-06
  • Deposition author(s): Allgardsson, A., Andersson, C.D., Akfur, C., Worek, F., Linusson, A., Ekstrom, F.

Revision History

  • Version 1_0: 2017-09-06

    Type: Initial release

  • Version 1_1: 2017-09-20

    Type: Database references