5NCA

Solution structure of ComGC from Streptococcus pneumoniae


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: 20 structures for lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Structure of the competence pilus major pilin ComGC in Streptococcus pneumoniae.

Muschiol, S.Erlendsson, S.Aschtgen, M.S.Oliveira, V.Schmieder, P.de Lichtenberg, C.Teilum, K.Boesen, T.Akbey, U.Henriques-Normark, B.

(2017) J Biol Chem 292: 14134-14146

  • DOI: https://doi.org/10.1074/jbc.M117.787671
  • Primary Citation of Related Structures:  
    5NCA

  • PubMed Abstract: 

    Type IV pili are important virulence factors on the surface of many pathogenic bacteria and have been implicated in a wide range of diverse functions, including attachment, twitching motility, biofilm formation, and horizontal gene transfer. The respiratory pathogen Streptococcus pneumoniae deploys type IV pili to take up DNA during transformation. These "competence pili" are composed of the major pilin protein ComGC and exclusively assembled during bacterial competence, but their biogenesis remains unclear. Here, we report the high resolution NMR structure of N-terminal truncated ComGC revealing a highly flexible and structurally divergent type IV pilin. It consists of only three α-helical segments forming a well-defined electronegative cavity and confined electronegative and hydrophobic patches. The structure is particularly flexible between the first and second α-helix with the first helical part exhibiting slightly slower dynamics than the rest of the pilin, suggesting that the first helix is involved in forming the pilus structure core and that parts of helices two and three are primarily surface-exposed. Taken together, our results provide the first structure of a type IV pilin protein involved in the formation of competence-induced pili in Gram-positive bacteria and corroborate the remarkable structural diversity among type IV pilin proteins.


  • Organizational Affiliation

    From the Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 77 Stockholm, Sweden,; Department of Clinical Microbiology, Karolinska University Hospital, 171 76 Stockholm, Sweden,. Electronic address: sandra.muschiol@ki.se.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Competence protein ComGC69Streptococcus pneumoniaeMutation(s): 0 
Gene Names: ERS325003_01925ERS409372_01422ERS515225_01852
UniProt
Find proteins for A0A0H2URU9 (Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4))
Explore A0A0H2URU9 
Go to UniProtKB:  A0A0H2URU9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0H2URU9
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: 20 structures for lowest energy 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Swedish Foundation for Strategic researchSweden--
The Carlsberg FoundationDenmark--
The Lundbeck FoundationDenmark--

Revision History  (Full details and data files)

  • Version 1.0: 2017-07-05
    Type: Initial release
  • Version 1.1: 2017-07-12
    Changes: Database references
  • Version 1.2: 2017-09-06
    Changes: Database references
  • Version 1.3: 2023-06-14
    Changes: Database references, Other