5LNX

Crystal structure of MmgC, an acyl-CoA dehydrogenase from bacillus subtilis.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 0.285 
  • R-Value Work: 0.247 
  • R-Value Observed: 0.249 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of acyl-CoA dehydrogenase (MmgC) from bacillus subtilis.

Baker, G.E.Race, P.R.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Acyl-CoA dehydrogenase
A, B, C, D, E
A, B, C, D, E, F, G, H
379Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: mmgCyqiNBSU24150
EC: 1.3.99
UniProt
Find proteins for P45857 (Bacillus subtilis (strain 168))
Explore P45857 
Go to UniProtKB:  P45857
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP45857
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
FAD
Query on FAD

Download Ideal Coordinates CCD File 
AA [auth H]
L [auth A]
M [auth B]
Q [auth C]
S [auth D]
AA [auth H],
L [auth A],
M [auth B],
Q [auth C],
S [auth D],
T [auth E],
V [auth F],
Y [auth G]
FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
GOL
Query on GOL

Download Ideal Coordinates CCD File 
I [auth A]
J [auth A]
K [auth A]
N [auth C]
O [auth C]
I [auth A],
J [auth A],
K [auth A],
N [auth C],
O [auth C],
P [auth C],
R [auth D],
U [auth F],
W [auth G],
X [auth G],
Z [auth H]
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 0.285 
  • R-Value Work: 0.247 
  • R-Value Observed: 0.249 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 78.168α = 90
b = 279.266β = 101.4
c = 78.191γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2017-08-16
    Type: Initial release
  • Version 1.1: 2019-10-16
    Changes: Data collection
  • Version 1.2: 2024-05-08
    Changes: Data collection, Database references