Download MendeleyNmeDAH7PS E98A variant at 2.5 Angstroms resolution
Heyes, L.C., Parker, E.J.To be published.
5CZ0
Neisseria meningitidis 3 dexy-D-arabino-heptulosonate 7-phosphate synthase Glu98Ala variant
- PDB DOI: https://doi.org/10.2210/pdb5CZ0/pdb
- Classification: TRANSFERASE
- Organism(s): Neisseria meningitidis MC58
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2015-07-31 Released: 2016-08-10
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.264
- R-Value Work: 0.200
- R-Value Observed: 0.204
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Phospho-2-dehydro-3-deoxyheptonate aldolase | 351 | Neisseria meningitidis MC58 | Mutation(s): 1 Gene Names: aroG, NMB0307 EC: 2.5.1.54 |  | |
UniProt | |||||
Find proteins for Q9K169 (Neisseria meningitidis serogroup B (strain MC58)) Explore Q9K169 Go to UniProtKB: Q9K169 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9K169 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PEP Query on PEP | G [auth A], K [auth B], M [auth C], P [auth D] | PHOSPHOENOLPYRUVATE C3 H5 O6 P DTBNBXWJWCWCIK-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | F [auth A], O [auth D] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| EDO Query on EDO | H [auth A], I [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| MN Query on MN | E [auth A], J [auth B], L [auth C], N [auth D] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.264
- R-Value Work: 0.200
- R-Value Observed: 0.204
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 73.85 | α = 90 |
| b = 135.25 | β = 95.95 |
| c = 76.04 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2016-08-10 Deposition Author(s): Heyes, L.C., Parker, E.J.
Revision History (Full details and data files)
- Version 1.0: 2016-08-10
Type: Initial release - Version 1.1: 2023-09-27
Changes: Data collection, Database references, Derived calculations, Refinement description
