Download MendeleyTrimeric structure of Vibrio cholerae Heat Shock Protein 15 at 2.3 Angstrom resolution
Roy Chowdhury, S., Sen, U.To be published.
5Z81
Trimeric structure of Vibrio cholerae Heat Shock Protein 15 at 2.3 Angstrom resolution
- PDB DOI: https://doi.org/10.2210/pdb5Z81/pdb
- Classification: CHAPERONE
- Organism(s): Vibrio cholerae O395
- Expression System: Escherichia coli-Pichia pastoris shuttle vector pPpARG4
- Mutation(s): No
- Deposited: 2018-01-30 Released: 2018-03-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.33 Å
- R-Value Free: 0.259
- R-Value Work: 0.228
- R-Value Observed: 0.231
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Heat shock protein 15 | 127 | Vibrio cholerae O395 | Mutation(s): 0 Gene Names: VC0395_A2308 |  | |
UniProt | |||||
Find proteins for A0A0H3AM46 (Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)) Explore A0A0H3AM46 Go to UniProtKB: A0A0H3AM46 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0H3AM46 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MPD Query on MPD | E [auth A], G [auth B], I [auth C] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N |  | ||
| SO4 Query on SO4 | D [auth A], F [auth B], H [auth C] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.33 Å
- R-Value Free: 0.259
- R-Value Work: 0.228
- R-Value Observed: 0.231
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.65 | α = 90 |
| b = 90.28 | β = 103.92 |
| c = 81.09 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| iMOSFLM | data reduction |
| Aimless | data scaling |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2018-03-07 Deposition Author(s): Roy Chowdhury, S., Sen, U.
Revision History (Full details and data files)
- Version 1.0: 2018-03-07
Type: Initial release - Version 1.1: 2024-03-27
Changes: Data collection, Database references
