Crystal structure of Aspartyl-tRNA synthetase from Mycobacterium tuberculosis complexed with L-Aspartic Acid
Dranow, D.M., Lorimer, D.D., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Aspartate--tRNA(Asp/Asn) ligase | 616 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0  Gene Names: aspS, Rv2572c, MTCY227.29 EC: 6.1.1.23 | ||
UniProt | |||||
Find proteins for P9WFW3 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WFW3  Go to UniProtKB:  P9WFW3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P9WFW3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
LYS Query on LYS | D [auth A], E [auth A], H [auth B] | LYSINE C6 H15 N2 O2 KDXKERNSBIXSRK-YFKPBYRVSA-O | |||
GLU Query on GLU | F [auth A], I [auth B] | GLUTAMIC ACID C5 H9 N O4 WHUUTDBJXJRKMK-VKHMYHEASA-N | |||
ASP Query on ASP | C [auth A], G [auth B] | ASPARTIC ACID C4 H7 N O4 CKLJMWTZIZZHCS-REOHCLBHSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 64.72 | α = 90 |
b = 158.24 | β = 93.77 |
c = 75.74 | γ = 90 |
Software Name | Purpose |
---|---|
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
MoRDa | phasing |