Crystal structure of a transketolase from Neisseria gonorrhoeae
Edwards, T.E., Delker, S.L., Lorimer, D.D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Transketolase | 667 | Neisseria gonorrhoeae NCCP11945 | Mutation(s): 0  Gene Names: NGK_0759 EC: 2.2.1.1 | ||
UniProt | |||||
Find proteins for B4RKU9 (Neisseria gonorrhoeae (strain NCCP11945)) Explore B4RKU9  Go to UniProtKB:  B4RKU9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | B4RKU9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EDO Query on EDO | E [auth A] L [auth C] M [auth C] Q [auth D] R [auth D] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CA Query on CA | F [auth A] G [auth A] H [auth A] I [auth B] J [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
OCS Query on OCS | A, B, C, D | L-PEPTIDE LINKING | C3 H7 N O5 S | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 82.45 | α = 90 |
b = 114.21 | β = 90.11 |
c = 125.69 | γ = 90 |
Software Name | Purpose |
---|---|
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
MOLREP | phasing |