Crystal structure of nucleoside diphosphate kinase from Neisseria gonorrhoeae in complex with citrate
Abendroth, J., Mayclin, S.J., Lorimer, D.D., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Nucleoside diphosphate kinase | 149 | Neisseria gonorrhoeae NCCP11945 | Mutation(s): 0  Gene Names: ndk, NGK_1320 EC: 2.7.4.6 | ||
UniProt | |||||
Find proteins for B4RMG0 (Neisseria gonorrhoeae (strain NCCP11945)) Explore B4RMG0  Go to UniProtKB:  B4RMG0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | B4RMG0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CIT Query on CIT | AA [auth E] AB [auth P] CA [auth F] EA [auth G] HA [auth H] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N | |||
EDO Query on EDO | BA [auth E] BB [auth P] DA [auth F] FA [auth G] GA [auth H] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 57.24 | α = 104.31 |
b = 112.35 | β = 98.5 |
c = 112.87 | γ = 105.39 |
Software Name | Purpose |
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PHENIX | refinement |
XSCALE | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
MOLREP | phasing |