The crystal structure of a LacI-type transcription regulator from Bifidobacterium animalis subsp. lactis DSM 10140
Tan, K., Li, H., Endres, M., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
LacI-type transcriptional regulator | 347 | Bifidobacterium animalis subsp. lactis AD011 | Mutation(s): 0  Gene Names: BLA_0054 | ||
UniProt | |||||
Find proteins for B8DV56 (Bifidobacterium animalis subsp. lactis (strain AD011)) Explore B8DV56  Go to UniProtKB:  B8DV56 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | B8DV56 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | B [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
NO3 Query on NO3 | C [auth A] D [auth A] E [auth A] F [auth A] G [auth A] | NITRATE ION N O3 NHNBFGGVMKEFGY-UHFFFAOYSA-N |
Modified Residues 2 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
CSO Query on CSO | A | L-PEPTIDE LINKING | C3 H7 N O3 S | CYS | |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 72.326 | α = 90 |
b = 60.171 | β = 109.22 |
c = 67.188 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
HKL-3000 | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM115586 |