5TK4

Crystal Structure of Uncharacterized Cupredoxin-like Domain Protein from Bacillus anthracis

• PDB DOI: https://doi.org/10.2210/pdb5TK4/pdb

• Classification: OXIDOREDUCTASE
• Organism(s): Bacillus anthracis str. Ames
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2016-10-06 Released: 2016-11-16 
• Deposition Author(s): Kim, Y., Maltseva, N., Shatsman, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
• Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.46 Å
• R-Value Free: 0.163 
• R-Value Work: 0.128 
• R-Value Observed: 0.129 

Literature

Crystal Structure of Uncharacterized Cupredoxin-like Domain Protein from Bacillus anthracis

Kim, Y., Maltseva, N., Shatsman, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 22.27 kDa 
• Atom Count: 1,783 
• Modelled Residue Count: 184 
• Deposited Residue Count: 200 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome B	A, B	100	Bacillus anthracis str. Ames	Mutation(s): 0
UniProt
Find proteins for A0A6L7H6L8 (Bacillus anthracis) Explore A0A6L7H6L8  Go to UniProtKB:  A0A6L7H6L8

Small Molecules

Modified Residues  2 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET
OCS	A, B	L-PEPTIDE LINKING	C3 H7 N O5 S		CYS

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.46 Å
• R-Value Free: 0.163 
• R-Value Work: 0.128 
• R-Value Observed: 0.129 
• Space Group: P 4₃
• Diffraction Data: https://doi.org/10.18430/M35TK4

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 42.695	α = 90
b = 42.695	β = 90
c = 100.318	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-3000	data reduction
HKL-3000	data scaling
HKL-3000	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2016-11-16 
Deposition Author(s): Kim, Y., Maltseva, N., Shatsman, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	--

Revision History  

• Version 1.0: 2016-11-16
  Type: Initial release
  
• Version 1.1: 2017-02-08
  Changes: Database references, Structure summary
• Version 1.2: 2017-09-27
  Changes: Author supporting evidence
• Version 1.3: 2019-12-04
  Changes: Author supporting evidence
• Version 1.4: 2023-10-04
  Changes: Data collection, Database references, Refinement description
• Version 1.5: 2023-11-15
  Changes: Data collection