5MYX

Structure of Pyroglutamate-Abeta-specific Fab c#24 in complex with human Abeta-pE3-18


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.49 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 5MYX

Classification: IMMUNE SYSTEM

Total Structure Weight: 105330.26

Macromolecule Entities
Molecule Chains Length Organism Details
Fab c#24 light chain A, C 219 Mus musculus
Fab c#24 heavy chain B, D 248 Mus musculus Details: Pyroglutamate residue 1 (PCA) results from post-translational modification of original residue glutamine 1.
Pyroglutamate-Abeta pE3-18 E, F 16 Homo sapiens Gene Name(s): APP Gene View A4 AD1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
B, D, E, F L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.49 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.181
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 115.61 α = 90.00
b = 95.93 β = 101.17
c = 90.37 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-01-30
  • Released Date: 2017-06-28
  • Deposition author(s): Parthier, C., Piechotta, A., Stubbs, M.T.

Revision History

  • Version 1_0: 2017-06-28

    Type: Initial release

  • Version 1_1: 2017-08-09

    Type: Database references